STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL11570.1Hypothetical protein. (592 aa)    
Predicted Functional Partners:
KRL12083.1
Abortive infection protein.
 
     0.714
KRL12030.1
Hypothetical protein.
  
     0.687
KRL11522.1
Abortive infection protein.
 
     0.679
KRL09796.1
Hypothetical protein.
  
     0.609
KRL11514.1
Hypothetical protein.
  
     0.521
KRL10938.1
Brca-like bacitracin transport atp-binding protein.
  
     0.505
KRL10308.1
Hypothetical protein.
  
     0.472
KRL10907.1
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
     0.448
KRL12315.1
Peptidase S24-like protein; Belongs to the peptidase S24 family.
  
     0.444
KRL10442.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Lactobacillus otakiensis
NCBI taxonomy Id: 1423780
Other names: L. otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis DSM 19908, Lactobacillus otakiensis DSM 19908 = JCM 15040, Lactobacillus otakiensis JCM 15040, Lactobacillus otakiensis JCM 15040 = DSM 19908
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.