STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM68207.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
KRM68208.1
Family 2 glycosyl transferase.
 
 
 0.955
KRM67580.1
Phage-related glycosyl transferase, group 2.
 
 
 0.858
KRM67791.1
beta-N-acetylhexosaminidase.
 
   
 0.753
KRM67612.1
Hypothetical protein.
 
  
 0.614
KRM67988.1
Lysozyme domain-containing protein.
  
   
 0.585
KRM69686.1
Lysozyme domain-containing protein.
  
   
 0.577
KRM68156.1
Hypothetical protein.
  
     0.560
KRM69596.1
Hypothetical protein.
  
   
 0.527
KRM69737.1
Hypothetical protein.
 
     0.499
KRM68330.1
Glycosyltransferase csbB.
  
 
 0.477
Your Current Organism:
Lactobacillus ozensis
NCBI taxonomy Id: 1423781
Other names: L. ozensis DSM 23829 = JCM 17196, Lactobacillus ozensis DSM 23829, Lactobacillus ozensis DSM 23829 = JCM 17196, Lactobacillus ozensis JCM 17196, Lactobacillus ozensis JCM 17196 = DSM 23829, Lactobacillus ozensis Mizu2-1, Lactobacillus sp. Mizu2-1
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