STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM27217.1DNA-binding response regulator. (235 aa)    
Predicted Functional Partners:
KRM27218.1
PAS domain S-box protein.
 0.999
KRM24796.1
Hypothetical protein.
 0.965
KRM30101.1
Sensor histidine kinase.
 0.948
KRM30981.1
Atpase histidine kinase dna gyrase b hsp90 domain protein.
 0.948
KRM28187.1
Histidine kinase A domain protein.
 
 0.912
KRM27447.1
ATPase histidine kinase DNA gyrase B HSP90 domain protein.
  
 0.857
KRM27219.1
YycH protein.
  
  
 0.841
KRM27220.1
Hypothetical protein.
  
  
 0.825
KRM27221.1
Metallo-beta-lactamase superfamily protein.
  
  
 0.810
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
     
 0.795
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.