STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM27149.1Transcriptional regulator. (334 aa)    
Predicted Functional Partners:
KRM25403.1
Ribose operon repressor.
  
   
 0.780
KRM29156.1
Ribose operon repressor.
  
   
 0.779
KRM28729.1
Catabolite control protein B.
  
     0.775
KRM26411.1
LacI family transcriptional regulator.
  
     0.774
KRM26080.1
Transcriptional regulator, LacI family.
  
     0.774
KRM28198.1
Transcriptional regulator, LacI family.
  
     0.772
KRM26723.1
GntR family transcriptional regulator.
  
     0.719
KRM26729.1
Arabinose metabolism transcriptional repressor.
  
     0.705
KRM25553.1
PTS family porter, phosphocarrier protein HPR.
   
 
 0.680
KRM29583.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.657
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.