STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM25505.1Iron dependent repressor, N-terminal DNA binding domain protein. (212 aa)    
Predicted Functional Partners:
KRM26818.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.886
KRM26836.1
Zinc iron ABC superfamily ATP binding cassette transporter, membrane protein.
  
 
 0.838
KRM26835.1
ABC transporter, ATP-binding protein.
  
 
 0.829
KRM25504.1
Cation diffusion facilitator family transporter.
     
 0.796
metN
D-methionine ABC superfamily ATP binding cassette transporter, ABC protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.747
KRM26834.1
ABC transporter, substrate-binding protein.
  
 
 0.719
KRM29604.1
ABC superfamily ATP binding cassette transporter, binding protein.
  
 
 0.719
KRM29605.1
Hypothetical protein.
  
 
 0.719
KRM25348.1
Hypothetical protein.
   
   0.716
KRM26324.1
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
  
 0.669
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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