STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM25279.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
KRM25281.1
ABC superfamily ATP binding cassette transporter, permease protein.
 
  
 0.985
KRM25280.1
Abc transporter, atp-binding protein.
 
  
 0.975
KRM25282.1
Hypothetical protein.
       0.644
KRM25292.1
Transcription regulator.
  
     0.488
KRM25583.1
Hypothetical protein.
  
     0.480
KRM28766.1
Membrane protein.
  
  
 0.471
KRM25283.1
Transporter, CPA2 family.
       0.468
KRM24958.1
Phosphomethylpyrimidine kinase.
  
    0.449
KRM28813.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
     0.449
KRM25278.1
Membrane protein.
       0.443
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.