STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM25086.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
KRM25087.1
Hypothetical protein.
  
    0.908
KRM25085.1
Cell cycle protein, FtsW RodA SpoVE family; Belongs to the SEDS family.
       0.855
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.855
KRM25089.1
PDZ domain protein.
       0.855
KRM25090.1
PTS family cellobiose porter, IIA component.
       0.696
KRM25394.1
Hypothetical protein; Belongs to the UPF0342 family.
 
    0.665
KRM25084.1
GTP-binding protein TypA.
       0.648
KRM25093.1
DNA polymerase III, delta subunit.
 
     0.617
KRM24681.1
Hypothetical protein.
  
     0.605
KRM25092.1
ComE operon protein 3.
       0.573
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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