STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM25062.1ABC transporter, permease protein. (507 aa)    
Predicted Functional Partners:
KRM25063.1
Arginine abc transporter, atp-binding protein artm.
 0.996
KRM28299.1
Arginine ABC transporter, ATP-binding protein ArtM.
 0.983
KRM24950.1
ABC transporter related.
 0.977
KRM26702.1
Glutamine ABC transporter, ATP-binding protein GlnQ.
 0.971
KRM25832.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 0.960
KRM28298.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.892
KRM28165.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.864
KRM31207.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
0.862
KRM28820.1
Oxidoreductase.
   
 
  0.770
KRM25831.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
0.701
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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