STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM24660.1Competence CoiA family protein. (332 aa)    
Predicted Functional Partners:
mecA
Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
 
     0.784
KRM26188.1
Hypothetical protein.
  
     0.744
KRM24997.1
TPR domain protein.
  
     0.711
cinA
Competence damage-inducible protein CinA N-terminal domain protein; Belongs to the CinA family.
      
 0.692
KRM24658.1
Transcriptional regulator spx; Belongs to the ArsC family.
 
   
 0.651
KRM26633.1
Bacterial peptidase A24, N-terminal domain protein.
   
    0.624
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.605
KRM30727.1
YihY family protein; Belongs to the UPF0761 family.
  
     0.550
KRM25004.1
Hypothetical protein.
  
     0.540
KRM26964.1
Cvpa family protein.
  
     0.529
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.