Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRM24665.1 | KRM24666.1 | FD32_GL001435 | FD32_GL001436 | 6-phosphogluconolactonase. | Hypothetical protein. | 0.611 |
| KRM24665.1 | KRM24667.1 | FD32_GL001435 | FD32_GL001437 | 6-phosphogluconolactonase. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.410 |
| KRM24666.1 | KRM24665.1 | FD32_GL001436 | FD32_GL001435 | Hypothetical protein. | 6-phosphogluconolactonase. | 0.611 |
| KRM24666.1 | KRM24667.1 | FD32_GL001436 | FD32_GL001437 | Hypothetical protein. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.573 |
| KRM24666.1 | KRM24668.1 | FD32_GL001436 | FD32_GL001438 | Hypothetical protein. | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | 0.511 |
| KRM24667.1 | KRM24665.1 | FD32_GL001437 | FD32_GL001435 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 6-phosphogluconolactonase. | 0.410 |
| KRM24667.1 | KRM24666.1 | FD32_GL001437 | FD32_GL001436 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Hypothetical protein. | 0.573 |
| KRM24667.1 | KRM24668.1 | FD32_GL001437 | FD32_GL001438 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | 0.829 |
| KRM24667.1 | KRM25824.1 | FD32_GL001437 | FD32_GL000656 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | NOL1 NOP2 sun family protein. | 0.439 |
| KRM24667.1 | KRM26699.1 | FD32_GL001437 | FD32_GL000288 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Peptidase M16 inactive domain protein. | 0.409 |
| KRM24667.1 | aspS | FD32_GL001437 | FD32_GL001042 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.424 |
| KRM24667.1 | rlmH | FD32_GL001437 | FD32_GL000062 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | SPOUT methyltransferase superfamily protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.578 |
| KRM24667.1 | tig | FD32_GL001437 | FD32_GL000996 | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.452 |
| KRM24668.1 | KRM24666.1 | FD32_GL001438 | FD32_GL001436 | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | Hypothetical protein. | 0.511 |
| KRM24668.1 | KRM24667.1 | FD32_GL001438 | FD32_GL001437 | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.829 |
| KRM24668.1 | KRM26699.1 | FD32_GL001438 | FD32_GL000288 | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | Peptidase M16 inactive domain protein. | 0.400 |
| KRM25824.1 | KRM24667.1 | FD32_GL000656 | FD32_GL001437 | NOL1 NOP2 sun family protein. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.439 |
| KRM25824.1 | rlmH | FD32_GL000656 | FD32_GL000062 | NOL1 NOP2 sun family protein. | SPOUT methyltransferase superfamily protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.409 |
| KRM26699.1 | KRM24667.1 | FD32_GL000288 | FD32_GL001437 | Peptidase M16 inactive domain protein. | RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.409 |
| KRM26699.1 | KRM24668.1 | FD32_GL000288 | FD32_GL001438 | Peptidase M16 inactive domain protein. | Stage III sporulation protein E; Belongs to the FtsK/SpoIIIE/SftA family. | 0.400 |
page 1 of 2