STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM30718.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
KRM30720.1
Hypothetical protein.
 
    0.795
KRM27612.1
Peptidase, M23 family.
  
    0.775
KRM25131.1
Hypothetical protein.
  
    0.771
KRM25475.1
Hypothetical protein.
 
     0.757
KRM30719.1
Hypothetical protein.
 
     0.757
KRM27613.1
KxYKxGKxW signal domain protein.
  
     0.756
KRM30715.1
Glycosyl transferase family 2.
 
 
 0.711
KRM25560.1
Hypothetical protein.
 
     0.708
KRM27619.1
Hypothetical protein.
  
     0.707
KRM30721.1
Group 2 glycosyl transferase.
  
 
 0.684
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.