STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM30722.1Capsular biosynthesis protein. (228 aa)    
Predicted Functional Partners:
KRM27611.1
Polysaccharide biosynthesis protein.
 
  
 0.899
KRM30720.1
Hypothetical protein.
 
 
 0.872
KRM27610.1
UDP-galactopyranose mutase.
 
  
 0.842
KRM30723.1
Undecaprenyl-phosphate galactose phosphotransferase.
     
 0.818
KRM30714.1
Glycosyltransferase.
 
   
 0.809
KRM30716.1
Glycosyltransferase.
 
   
 0.768
KRM30719.1
Hypothetical protein.
 
     0.610
KRM30721.1
Group 2 glycosyl transferase.
  
  
 0.605
KRM27745.1
ABC1 family protein kinase.
  
 
 0.564
KRM29558.1
UTP-glucose-1-phosphate uridylyltransferase.
    
  0.502
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.