STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM29151.1ABC transporter, ATP-binding protein. (224 aa)    
Predicted Functional Partners:
KRM29150.1
ABC superfamily ATP binding cassette transporter permease protein.
 
 0.996
KRM29152.1
Molybdenum cofactor biosynthesis protein C.
 
0.953
KRM29149.1
Transcriptional regulator.
 
 
   0.938
KRM27449.1
ABC antimicrobial peptide transport system, permease protein.
  
 0.912
KRM26703.1
Polar amino acid ABC transporter inner membrane protein.
 
 
 
  0.787
ecfA-2
D-methionine ABC superfamily ATP binding cassette transporter, ABC protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.770
KRM28298.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.748
KRM28165.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.731
KRM31207.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.725
KRM25062.1
ABC transporter, permease protein.
 
 
 0.695
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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