STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM29062.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
KRM29060.1
Hypothetical protein.
 
 
 0.832
KRM29063.1
Glycosyltransferase.
  
    0.780
KRM29065.1
Polysaccharide biosynthesis protein.
  
  
 0.741
KRM29061.1
Hypothetical protein.
       0.732
KRM29064.1
Hypothetical protein.
       0.732
KRM29066.1
Hypothetical protein.
  
    0.726
KRM29068.1
Hypothetical protein.
 
  
 0.578
KRM29070.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.548
KRM27022.1
Sugar transferase.
  
 
 0.525
KRM30723.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.525
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.