STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM28950.1Putative stress induced DNA binding protein (putative); Belongs to the Dps family. (185 aa)    
Predicted Functional Partners:
KRM28951.1
Hypothetical protein.
 
  
 0.984
KRM27593.1
Hypothetical protein.
 
  
 0.899
KRM28952.1
Cadmium transporting P-type ATPase.
 
    0.860
KRM30010.1
Thioredoxin-disulfide reductase.
  
  
 0.619
KRM28953.1
Putative transcription regulator (putative).
 
 
   0.597
KRM27591.1
CRP FNR family transcriptional regulator.
 
     0.550
KRM27594.1
Heavy metal translocating P-type ATPase.
 
    0.520
KRM29846.1
Hypothetical protein.
  
     0.517
KRM28954.1
ABC transporter, permease protein.
 
     0.512
KRM30011.1
Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.503
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.