STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM28161.1Lipoprotein. (315 aa)    
Predicted Functional Partners:
KRM29155.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.822
KRM27614.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
  
 
0.765
KRM24813.1
Hypothetical protein.
  
   0.757
KRM27619.1
Hypothetical protein.
    
0.695
KRM24704.1
Extracellular protein, gamma-D-glutamate-meso-diaminopimelate muropeptidase.
  
 
 0.596
KRM24705.1
Hypothetical protein.
  
 
 0.596
KRM27169.1
Kxykxgkxw signal domain protein.
  
 
0.569
KRM25814.1
Penicillin-binding protein 1A.
    
 0.494
KRM25395.1
Penicillin-binding protein 2A.
    
 0.494
KRM25475.1
Hypothetical protein.
  
 
0.481
Your Current Organism:
Lactobacillus panis
NCBI taxonomy Id: 1423782
Other names: L. panis DSM 6035, Lactobacillus panis DSM 6035
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.