STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL86425.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
KRL86426.1
Hypothetical protein.
       0.774
KRL86424.1
Hypothetical protein.
       0.749
KRL86427.1
Hypothetical protein.
       0.744
KRL86428.1
Hypothetical protein.
       0.729
KRL86432.1
Hypothetical protein.
       0.693
KRL86429.1
Hypothetical protein.
       0.687
KRL86430.1
Hypothetical protein.
       0.687
KRL86431.1
Hypothetical protein.
       0.687
KRL86422.1
Prophage Lp1 protein 39.
       0.550
KRL86420.1
Hypothetical protein.
       0.517
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.