STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL86241.1Extracellular solute-binding protein; Belongs to the bacterial solute-binding protein 3 family. (268 aa)    
Predicted Functional Partners:
KRL86243.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 0.999
KRL86242.1
Amino acid abc transporter, atp-binding protein.
 
 0.996
KRL85923.1
Amino acid ABC transporter, amino acid-binding permease protein.
 0.975
KRL85963.1
ABC-type amino acid transport system protein.
 0.912
KRL84459.1
Amino acid ABC transporter permease.
 0.905
KRL85964.1
Amino acid ABC transporter permease.
 0.875
KRL85922.1
Polar amino acid ABC transporter ATPase.
 
 0.804
KRL85966.1
ABC-type polar amino acid transport system, ATPase component.
 
 0.803
KRL87033.1
ABC-type polar amino acid transport system, ATPase component.
 
 0.799
KRL87035.1
ABC-type polar amino acid transport system protein.
 
 0.799
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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