STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL85411.1Hypothetical protein; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (136 aa)    
Predicted Functional Partners:
tdk
Thymidine kinase.
 
  
 0.977
udk
Uridine kinase.
    
 0.974
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.956
deoD
Purine nucleoside phosphorylase.
  
 
 0.954
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
     0.922
KRL85409.1
Phosphate starvation-inducible protein PhoH, ATPase.
  
    0.910
KRL86343.1
HAD superfamily hydrolase.
 
   
  0.906
ybeY
Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.887
KRL87235.1
Phosphorylase pnp udp family protein.
  
 
 0.848
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.766
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.