STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL85432.1Membrane protein. (321 aa)    
Predicted Functional Partners:
KRL84701.1
Peptide ABC transporter ATPase.
 
 0.980
KRL85857.1
Peptide ABC transporter ATPase.
  
 0.911
KRL86892.1
ABC transporter ATP-binding protein permease.
  
 0.910
KRL86676.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 0.910
KRL86549.1
ABC transporter, ATP-binding protein.
  
 0.910
KRL85950.1
ABC transporter ATPase.
  
 0.910
KRL84691.1
ABC transporter ATP-binding protein.
  
 0.910
KRL88248.1
Malk1; Belongs to the ABC transporter superfamily.
  
 0.910
KRL85433.1
tRNA and rRNA cytosine-C5-methylase.
       0.781
KRL85431.1
SAM-dependent methyltransferase.
 
     0.780
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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