STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84917.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
KRL84915.1
Hypothetical protein.
 
     0.952
KRL84916.1
Hypothetical protein.
 
     0.949
KRL86422.1
Prophage Lp1 protein 39.
  
     0.598
KRL85385.1
Hypothetical protein.
  
     0.499
KRL86436.1
Prophage Lp2 protein 49.
  
     0.488
KRL84914.1
Na(+) H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.447
KRL86420.1
Hypothetical protein.
  
     0.443
KRL86423.1
Hypothetical protein.
  
     0.433
KRL86421.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.