STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84674.1SgaT protein. (427 aa)    
Predicted Functional Partners:
KRL84673.1
Hypothetical protein.
 
 
 0.979
KRL84672.1
Hypothetical protein.
 
 
 0.970
KRL85906.1
Hypothetical protein.
 
 
 0.921
KRL85905.1
Hypothetical protein.
 
 
 0.914
KRL85907.1
Hypothetical protein.
 
 
 0.907
KRL85832.1
Hypothetical protein.
 
 
 0.733
KRL88075.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PRD.
  
 
 0.665
KRL88073.1
Protein FruA.
  
 
 0.626
KRL86338.1
PTS family porter fructose-specific component IIB.
  
 
 0.626
KRL85872.1
PTS system fructose-specific transporter subunit IIABC.
  
 
 0.626
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.