STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84386.1Glycopeptide antibiotics resistance protein. (224 aa)    
Predicted Functional Partners:
KRL87527.1
Hypothetical protein.
  
     0.770
KRL85398.1
Hypothetical protein.
  
     0.631
KRL84385.1
Phosphoglycerol transferase alkaline phosphatase superfamily protein.
       0.608
KRL87605.1
Hypothetical protein.
  
     0.607
KRL86075.1
Hypothetical protein.
  
     0.592
mprF
Membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
  
   
 0.582
purH
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase IMP cyclohydrolase.
     
 0.551
KRL86064.1
Hypothetical protein.
  
     0.538
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
     
 0.503
KRL87983.1
Cell wall-associated hydrolase.
  
     0.479
Your Current Organism:
Lactobacillus pantheris
NCBI taxonomy Id: 1423783
Other names: L. pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris DSM 15945, Lactobacillus pantheris DSM 15945 = JCM 12539 = NBRC 106106, Lactobacillus pantheris JCM 12539, Lactobacillus pantheris NBRC 106106
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