STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81852.1Glycoside hydrolase. (514 aa)    
Predicted Functional Partners:
KRK81853.1
Permeases of the major facilitator superfamily.
 
     0.879
KRK83229.1
Hypothetical protein.
  
 
 0.879
KRK82678.1
Hypothetical protein.
  
 
 0.878
KRK82087.1
Hypothetical protein.
    
 0.863
KRK83214.1
Cell surface protein precursor.
    
 0.863
KRK82309.1
Hypothetical protein.
    
 0.863
KRK82404.1
Hypothetical protein.
    
 0.863
KRK82484.1
Hypothetical protein.
    
 0.863
KRK81856.1
L-fucose isomerase.
 
     0.789
KRK83976.1
Hypothetical protein.
 
 
 0.767
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.