STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK81498.1OmpR family DNA-binding response regulator. (233 aa)    
Predicted Functional Partners:
KRK81497.1
Two-component system, sensor histidine kinase.
 0.997
KRK83778.1
Integral membrane sensor signal transduction histidine kinase.
 0.969
KRK82671.1
Sensor histidine kinase.
 0.968
KRK83574.1
Histidine protein kinase.
 0.967
KRK82271.1
Histidine protein kinase.
 0.966
KRK82710.1
Two component sensor transduction histidine kinase.
 0.959
KRK81615.1
Two-component system, sensor histidine kinase.
 0.951
KRK83325.1
Signal transduction histidine kinase.
 
 0.946
KRK83715.1
Histidine protein kinase.
 0.941
KRK84732.1
Signal transduction histidine kinase.
 0.924
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.