STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK84540.1Prophage Lp2 protein 50. (731 aa)    
Predicted Functional Partners:
KRK84541.1
Hypothetical protein.
 
   0.993
KRK84542.1
Phage-related tail protein.
 
    0.968
KRK83470.1
Hypothetical protein.
 
 
 0.909
KRK84552.1
HK97 family phage portal protein.
 
    0.908
KRK84893.1
Hypothetical protein.
  
 
 0.876
KRK84890.1
Prophage Lp2 protein 49.
 
    0.870
KRK84889.1
Phage tape measure protein.
 
    0.869
KRK84550.1
Phage-related major head protein.
 
    0.858
KRK83471.1
Gp13 protein.
  
   0.846
KRK84554.1
Hypothetical protein.
 
    0.822
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.