STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK84371.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
KRK83955.1
Peptide ABC transporter permease transmembrane protein.
  
 0.955
KRK82674.1
Permease.
  
 0.942
KRK81814.1
Hypothetical protein.
  
 0.931
KRK82332.1
Antimicrobial peptide ABC transporter permease.
  
 0.931
KRK82409.1
ABC transporter permease.
  
 0.931
KRK83961.1
ABC transporter ATP-binding protein.
  
 0.928
KRK81821.1
Peptide ABC transporter ATPase.
  
 0.926
KRK83963.1
Permease.
  
 0.926
KRK84370.1
Tetracycline resistance protein.
 
   
 0.863
KRK84591.1
MSL methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
 
 
 0.779
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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