STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK85070.1Sodium hydrogen exchanger. (388 aa)    
Predicted Functional Partners:
KRK82698.1
CinA domain-containing protein; Belongs to the CinA family.
 
  
 0.925
KRK85069.1
Hypothetical protein.
       0.752
KRK83674.1
16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.733
KRK81804.1
Flavodoxin.
  
 
 0.673
KRK83628.1
NADPH-quinone reductase (modulator of drug activity B).
  
 
 0.673
guaB
Inosine 5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.653
KRK82749.1
Chloride channel protein.
     
 0.640
KRK81779.1
Cation transporting P-type ATPase.
  
 
 0.618
KRK82031.1
Cation transport ATPase.
  
 
 0.618
KRK83107.1
Cation transport ATPase.
  
 
 0.618
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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