STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK83902.1Major facilitator superfamily permease. (391 aa)    
Predicted Functional Partners:
KRK83905.1
Transport protein.
    
 0.776
KRK83904.1
Hypothetical protein.
 
     0.773
KRK83903.1
Alpha beta fold family hydrolase.
       0.741
KRK83906.1
Hypothetical protein.
       0.731
KRK81440.1
Hypothetical protein.
  
     0.593
KRK83901.1
Hypothetical protein.
 
     0.507
KRK82323.1
5-nucleotidase 2,3-cyclic phosphodiesterase related esterase.
  
     0.492
KRK81896.1
Hypothetical protein.
  
     0.469
KRK84063.1
Nitroreductase.
     
 0.468
KRK83914.1
Hypothetical protein.
 
     0.445
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.