STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK84022.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
KRK84021.1
Hypothetical protein.
    
0.976
KRK84030.1
Hypothetical protein.
 
 
 0.970
KRK84023.1
Hypothetical protein.
 
  
 0.812
KRK84019.1
Hypothetical protein.
 
     0.783
KRK84028.1
Ethanolamine utilization protein EutJ.
 
  
 0.781
cutC
Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
   
 0.774
KRK84020.1
Hypothetical protein.
       0.705
KRK84018.1
Hypothetical protein.
 
    
0.694
KRK84034.1
Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.573
KRK84025.1
Hypothetical protein.
 
   
 0.540
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.