STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK84092.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
KRK84091.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.887
KRK84088.1
Short chain dehydrogenase.
 
  
 0.872
KRK83135.1
Bile acid 7-alpha-dehydratase.
 
    0.572
KRK84090.1
Oxidoreductase.
 
    0.569
KRK82503.1
Fumarate reductase, flavoprotein subunit precursor.
    
 0.560
KRK82641.1
Hypothetical protein.
    
 0.556
KRK82333.1
Short-chain alcohol dehydrogenase.
 
  
 0.550
KRK82009.1
Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
    
 0.514
KRK82495.1
Hypothetical protein.
  
     0.514
KRK82342.1
Gamma-carboxymuconolactone decarboxylase subunit-like protein.
    
  0.510
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.