node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRK81674.1 | KRK83492.1 | FC78_GL000727 | FC78_GL001448 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exonuclease RNase T and DNA polymerase III. | 0.989 |
KRK81674.1 | KRK83493.1 | FC78_GL000727 | FC78_GL001449 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exonuclease III. | 0.989 |
KRK81674.1 | polA | FC78_GL000727 | FC78_GL001324 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
KRK81674.1 | rpoA | FC78_GL000727 | FC78_GL000288 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.541 |
KRK81674.1 | ung | FC78_GL000727 | FC78_GL001444 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.888 |
KRK83034.1 | KRK83493.1 | FC78_GL001841 | FC78_GL001449 | Pseudouridylate synthase, 16SrRNA-specific; Belongs to the pseudouridine synthase RsuA family. | Exonuclease III. | 0.787 |
KRK83034.1 | polA | FC78_GL001841 | FC78_GL001324 | Pseudouridylate synthase, 16SrRNA-specific; Belongs to the pseudouridine synthase RsuA family. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.410 |
KRK83492.1 | KRK81674.1 | FC78_GL001448 | FC78_GL000727 | Exonuclease RNase T and DNA polymerase III. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
KRK83492.1 | KRK83493.1 | FC78_GL001448 | FC78_GL001449 | Exonuclease RNase T and DNA polymerase III. | Exonuclease III. | 0.762 |
KRK83492.1 | polA | FC78_GL001448 | FC78_GL001324 | Exonuclease RNase T and DNA polymerase III. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.888 |
KRK83493.1 | KRK81674.1 | FC78_GL001449 | FC78_GL000727 | Exonuclease III. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.989 |
KRK83493.1 | KRK83034.1 | FC78_GL001449 | FC78_GL001841 | Exonuclease III. | Pseudouridylate synthase, 16SrRNA-specific; Belongs to the pseudouridine synthase RsuA family. | 0.787 |
KRK83493.1 | KRK83492.1 | FC78_GL001449 | FC78_GL001448 | Exonuclease III. | Exonuclease RNase T and DNA polymerase III. | 0.762 |
KRK83493.1 | KRK83746.1 | FC78_GL001449 | FC78_GL001328 | Exonuclease III. | Thioredoxin. | 0.694 |
KRK83493.1 | nfo | FC78_GL001449 | FC78_GL002037 | Exonuclease III. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.944 |
KRK83493.1 | nth | FC78_GL001449 | FC78_GL001995 | Exonuclease III. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.996 |
KRK83493.1 | polA | FC78_GL001449 | FC78_GL001324 | Exonuclease III. | DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.985 |
KRK83493.1 | rpoA | FC78_GL001449 | FC78_GL000288 | Exonuclease III. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.759 |
KRK83493.1 | rpoZ | FC78_GL001449 | FC78_GL001257 | Exonuclease III. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.807 |
KRK83493.1 | ung | FC78_GL001449 | FC78_GL001444 | Exonuclease III. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.865 |