STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK83138.1Transcription regulator. (194 aa)    
Predicted Functional Partners:
KRK83137.1
Hypothetical protein.
 
     0.866
KRK83135.1
Bile acid 7-alpha-dehydratase.
 
   
 0.840
KRK83136.1
Transport protein.
 
   
 0.655
KRK84135.1
Hypothetical protein.
  
     0.620
KRK83106.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
  
 
 
 0.581
KRK85046.1
Transcription regulator.
  
     0.565
KRK81869.1
Hypothetical protein.
 
     0.533
KRK83516.1
Hypothetical protein.
   
  
 0.525
KRK82725.1
Putative nucleotide pyrophosphatase (putative).
   
  
 0.525
KRK82116.1
Hypothetical protein.
  
     0.523
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.