STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK83156.1Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1A. (824 aa)    
Predicted Functional Partners:
KRK82891.1
Cell division protein FtsI penicillin-binding protein 2.
 
 
 0.970
KRK83705.1
Bifuntional dimerization transpeptidase.
 
 
 0.967
KRK82139.1
Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1B.
  
  
0.934
KRK81614.1
D-alanyl-D-alanine carboxypeptidase precursor; Belongs to the peptidase S11 family.
 
 
 0.932
KRK83759.1
Bifunctional glycolsyltransferase transpeptidase penicillin binding protein 2A.
  
  
0.932
KRK81693.1
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase PBP transpeptidase (candidate murein polymerase).
  
  
 
0.931
KRK83153.1
Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.922
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
 
 
 0.917
recU
Holliday junction-specific endonuclease; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
 0.902
KRK84879.1
Phage Mu protein F like protein.
   
 0.890
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.