STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK83168.1Alpha-l-rhamnosidase. (877 aa)    
Predicted Functional Partners:
KRK82087.1
Hypothetical protein.
  
 0.896
KRK83214.1
Cell surface protein precursor.
  
 0.896
KRK83229.1
Hypothetical protein.
  
 0.896
KRK82309.1
Hypothetical protein.
  
 0.896
KRK82404.1
Hypothetical protein.
  
 0.896
KRK82484.1
Hypothetical protein.
  
 0.896
KRK82678.1
Hypothetical protein.
  
 0.896
KRK83169.1
Transcriptional regulator-type.
 
     0.778
KRK81493.1
Serine protease HtrA.
    
 0.694
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.691
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.