STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK83360.1Hexapeptide repeat-containing transferase. (195 aa)    
Predicted Functional Partners:
KRK83361.1
Isoleucine patch superfamily acetyltransferase.
 
    
0.828
KRK83359.1
Hypothetical protein.
       0.763
KRK82615.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.564
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
  0.543
KRK83358.1
HAD superfamily hydrolase.
  
    0.532
KRK84595.1
Mobilization protein.
   
 0.523
KRK84505.1
Hypothetical protein.
   
 0.523
KRK83362.1
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
     
 0.504
atpG
F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
    
  0.493
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 
  0.491
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.