STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK82312.1ABC transporter, substrate binding protein. (321 aa)    
Predicted Functional Partners:
KRK82313.1
ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.996
KRK81571.1
ABC transporter integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
  0.991
KRK82314.1
ABC transporter, ATP-binding protein.
 
 
  0.975
KRK81572.1
ABC transport system ATP-binding protein.
 
 
  0.901
KRK83083.1
Ribose ABC transporter ATPase.
    
  0.562
KRK82550.1
Histidine protein kinase plnc8k.
    
  0.558
KRK83961.1
ABC transporter ATP-binding protein.
    
  0.536
KRK83085.1
ABC-type sugar transport system, periplasmic component.
    
  0.493
Your Current Organism:
Lactobacillus paralimentarius
NCBI taxonomy Id: 1423788
Other names: L. paralimentarius DSM 19674, Lactobacillus paralimentarius DSM 19674
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