Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRK82507.1 | atpA | FC78_GL002517 | FC78_GL001662 | NAD(FAD)-dependent dehydrogenase. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.789 |
| KRK82507.1 | atpD | FC78_GL002517 | FC78_GL001664 | NAD(FAD)-dependent dehydrogenase. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.795 |
| KRK82507.1 | atpG | FC78_GL002517 | FC78_GL001663 | NAD(FAD)-dependent dehydrogenase. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.779 |
| KRK82507.1 | atpH | FC78_GL002517 | FC78_GL001661 | NAD(FAD)-dependent dehydrogenase. | F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.782 |
| KRK82507.1 | ftsH | FC78_GL002517 | FC78_GL000247 | NAD(FAD)-dependent dehydrogenase. | ATP-dependent Zn protease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.773 |
| KRK82507.1 | rplS | FC78_GL002517 | FC78_GL001232 | NAD(FAD)-dependent dehydrogenase. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.668 |
| KRK82507.1 | rpmF | FC78_GL002517 | FC78_GL001824 | NAD(FAD)-dependent dehydrogenase. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.672 |
| KRK82507.1 | rpsE | FC78_GL002517 | FC78_GL000280 | NAD(FAD)-dependent dehydrogenase. | 30S ribosomal protein S5p (S2e); Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.789 |
| KRK82507.1 | rpsI | FC78_GL002517 | FC78_GL000295 | NAD(FAD)-dependent dehydrogenase. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.673 |
| KRK82507.1 | rpsP | FC78_GL002517 | FC78_GL001235 | NAD(FAD)-dependent dehydrogenase. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.675 |
| atpA | KRK82507.1 | FC78_GL001662 | FC78_GL002517 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | NAD(FAD)-dependent dehydrogenase. | 0.789 |
| atpA | atpD | FC78_GL001662 | FC78_GL001664 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
| atpA | atpG | FC78_GL001662 | FC78_GL001663 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | atpH | FC78_GL001662 | FC78_GL001661 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | ftsH | FC78_GL001662 | FC78_GL000247 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP-dependent Zn protease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.859 |
| atpA | rplS | FC78_GL001662 | FC78_GL001232 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.526 |
| atpA | rpmF | FC78_GL001662 | FC78_GL001824 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.559 |
| atpA | rpsE | FC78_GL001662 | FC78_GL000280 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 30S ribosomal protein S5p (S2e); Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.887 |
| atpA | rpsP | FC78_GL001662 | FC78_GL001235 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.532 |
| atpD | KRK82507.1 | FC78_GL001664 | FC78_GL002517 | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | NAD(FAD)-dependent dehydrogenase. | 0.795 |
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