STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN53_05595Transcriptional regulator, XRE family. (119 aa)    
Predicted Functional Partners:
BN53_03215
Beta-propeller domain of methanol dehydrogenase type.
  
     0.725
BN53_06625
Probable V-type sodium ATP synthase subunit.
  
     0.714
BN53_08615
Putative uncharacterized protein.
  
     0.665
BN53_09535
Putative uncharacterized protein.
  
     0.664
BN53_09645
Probable surface exclusion protein.
  
     0.661
BN53_08675
Putative uncharacterized protein.
  
 
  0.628
BN53_08175
Putative uncharacterized protein yycH.
  
     0.583
BN53_07140
Integral membrane protein.
  
     0.571
BN53_08630
Beta-lactamase.
  
     0.568
BN53_04945
Putative cell shape determining protein.
  
     0.538
Your Current Organism:
Lactobacillus pasteurii
NCBI taxonomy Id: 1423790
Other names: L. pasteurii DSM 23907 = CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76 = DSM 23907, Lactobacillus pasteurii DSM 23907, Lactobacillus pasteurii DSM 23907 = CRBIP 24.76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.