STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN53_07650Putative uncharacterized protein. (61 aa)    
Predicted Functional Partners:
BN53_08290
Putative uncharacterized protein.
  
     0.727
BN53_09810
Putative uncharacterized protein.
  
     0.717
BN53_03750
2,3-cyclic nucleotide.
  
     0.688
BN53_07675
Putative uncharacterized protein.
  
     0.653
BN53_03305
Putative uncharacterized protein.
  
     0.568
BN53_08835
Putative uncharacterized protein.
  
     0.560
BN53_07140
Integral membrane protein.
  
     0.552
BN53_07660
Putative uncharacterized protein.
 
     0.529
BN53_04710
TPR repeat-containing protein.
  
     0.519
BN53_08645
Metallo-beta-lactamase superfamily hydrolase.
  
     0.513
Your Current Organism:
Lactobacillus pasteurii
NCBI taxonomy Id: 1423790
Other names: L. pasteurii DSM 23907 = CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76 = DSM 23907, Lactobacillus pasteurii DSM 23907, Lactobacillus pasteurii DSM 23907 = CRBIP 24.76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.