STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN53_08300Glutamine ABC superfamily ATP binding cassette transporter, ABC protein. (251 aa)    
Predicted Functional Partners:
BN53_08305
Amino acid ABC transporter permease.
 0.998
BN53_08740
Glutamine ABC superfamily ATP binding cassette transporter, permease protein.
 0.995
BN53_07860
Glutamine ABC transporter, permease protein.
 0.993
BN53_08370
Amino acid ABC transporter, amino acid-binding/permease protein.
 0.991
BN53_07855
Glutamine ABC transporter, permease protein.
 0.985
BN53_07865
Amino acid ABC superfamily ATP binding cassette transporter, binding protein.
 0.947
BN53_02750
Oligopeptide ABC transporter, permease protein.
 
    
 0.901
BN53_06365
Multidrug ABC superfamily ATP binding cassette transporter, ABC protein.
 
     
0.900
BN53_08210
ABC transporter ATPase and permease components.
 
     
0.899
BN53_08970
Multidrug resistance ABC superfamily ATP binding cassette transporter, membrane protein.
 
     
0.899
Your Current Organism:
Lactobacillus pasteurii
NCBI taxonomy Id: 1423790
Other names: L. pasteurii DSM 23907 = CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76 = DSM 23907, Lactobacillus pasteurii DSM 23907, Lactobacillus pasteurii DSM 23907 = CRBIP 24.76
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