STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN53_09480SprT-like protein; Belongs to the SprT family. (158 aa)    
Predicted Functional Partners:
BN53_09485
Polysaccharide biosynthesis protein CpsM(V).
       0.773
BN53_09490
Capsular polysaccharide synthesis protein.
       0.773
BN53_09495
CDP-glycerol:glycerophosphate glycerophosphotransferase.
       0.773
BN53_03920
Initiation-control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.581
BN53_09510
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
    0.545
BN53_09500
Cation-transporting P-type ATPase.
       0.543
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.537
BN53_05670
UPF0398 protein LCRIS_01164; Belongs to the UPF0398 family.
  
     0.518
BN53_04745
ATP-dependent protease La.
 
     0.517
BN53_04125
Putative uncharacterized protein.
  
     0.514
Your Current Organism:
Lactobacillus pasteurii
NCBI taxonomy Id: 1423790
Other names: L. pasteurii DSM 23907 = CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76, Lactobacillus pasteurii CRBIP 24.76 = DSM 23907, Lactobacillus pasteurii DSM 23907, Lactobacillus pasteurii DSM 23907 = CRBIP 24.76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.