STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL11881.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
KRL11882.1
Hypothetical protein.
      0.932
KRL11880.1
Conjugative transposon protein.
       0.791
KRL11883.1
Conserved NLP P60 family protein.
       0.771
KRL11884.1
Conjugative transposon membrane protein.
       0.771
KRL11885.1
Hypothetical protein.
       0.759
KRL11886.1
Conjugative transposon membrane protein.
       0.757
KRL11887.1
Antirestriction protein ArdA.
       0.520
KRL11888.1
Hypothetical protein.
       0.520
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.