STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL10009.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
KRL10010.1
ABC-type Mn2+ Zn2+ transport system, permease component.
 0.999
KRL14799.1
Iron ABC transporter membrane protein.
 0.992
KRL13876.1
Zinc abc transporter, periplasmic-binding protein znua.
 
 
 0.992
ecfA
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
0.919
KRL14800.1
ABC transporter manganese-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.907
KRL08882.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
    
0.905
KRL12957.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.905
KRL13804.1
Abc-type dipeptide oligopeptide nickel transport system, atpase component; Belongs to the ABC transporter superfamily.
 
    
0.902
KRL12958.1
ABC superfamily ATP binding cassette transporter ABC protein; Belongs to the ABC transporter superfamily.
 
     
0.877
KRL12858.1
Hypothetical protein.
  
  
  0.807
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.