STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09618.1Abc transporter atp-binding and membrane spanning permease. (574 aa)    
Predicted Functional Partners:
KRL13001.1
Hlyb family abc transporter.
 
 
0.879
KRL12419.1
Multidrug ABC transporter ATPase and permease.
 
 
 0.850
KRL12437.1
Abc transporter atpase permease.
 
 
0.850
KRL14188.1
Hypothetical protein.
 
0.849
KRL13902.1
ABC multidrug transporter, ATPase and permease component.
 
0.845
KRL14280.1
ABC transporter transmembrane region family protein.
 
0.843
KRL09617.1
ABC transporter, ATP-binding protein.
 
 
 0.701
infB
infB protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
 
 0.688
KRL12579.1
Aaa atpase family protein; Belongs to the AAA ATPase family.
   
 0.677
KRL12588.1
Hypothetical protein.
   
 0.677
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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