STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09644.1OmpR family DNA-binding response regulator. (237 aa)    
Predicted Functional Partners:
KRL09645.1
Two-component sensor histidine kinase.
 0.999
KRL12731.1
Two component sensor transduction histidine kinase.
 0.991
KRL13444.1
Two component sensor transduction histidine kinase.
 0.983
KRL12891.1
Two component sensor transduction histidine kinase.
 0.977
KRL11921.1
Signal transduction histidine kinase.
 0.971
KRL13963.1
Signal transduction histidine kinase.
 0.970
KRL14759.1
Signal transduction histidine kinase.
 0.968
KRL14286.1
Signal transduction histidine kinase.
 0.967
KRL13403.1
His Kinase A domain protein.
 0.959
KRL14301.1
Two-component system, sensor histidine kinase.
 0.956
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.