STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL09647.1yycH family protein. (276 aa)    
Predicted Functional Partners:
KRL09646.1
Hypothetical protein.
 
  
 0.986
KRL09645.1
Two-component sensor histidine kinase.
 
  
 0.908
KRL09648.1
Beta-lactamase domain containing protein.
  
  
 0.862
KRL13959.1
Hypothetical protein.
  
     0.728
KRL09649.1
Serine protease HtrA.
  
  
 0.726
KRL12888.1
Hypothetical protein.
  
     0.711
KRL08806.1
Cbs domain-containing protein.
  
     0.700
KRL14195.1
Hypothetical protein.
  
     0.678
KRL09644.1
OmpR family DNA-binding response regulator.
  
  
 0.677
KRL14228.1
Hypothetical protein.
  
     0.658
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.