STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL14058.1Hypothetical protein; Belongs to the methyltransferase superfamily. (394 aa)    
Predicted Functional Partners:
KRL14119.1
GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
  
 0.677
KRL14182.1
GTP-binding protein TypA.
  
   0.666
KRL14139.1
16S rRNA pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
  
 
 0.642
KRL08443.1
Hypothetical protein; Belongs to the pseudouridine synthase RsuA family.
  
 
 0.641
argS
arginyl-tRNA synthetase.
 
    0.623
KRL13853.1
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
 
   0.614
KRL12881.1
GTP-binding protein YqeH.
  
  
 0.590
leuS
Leucyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.582
KRL13491.1
Exodeoxyribonuclease III.
  
    0.567
KRL11126.1
biotin--[acetyl-CoA-carboxylase] ligase.
  
    0.548
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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