STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL08483.1Low temperature requirement C protein. (168 aa)    
Predicted Functional Partners:
KRL13430.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.817
KRL08482.1
trxB1 protein.
 
     0.790
KRL13853.1
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
     
 0.740
KRL08401.1
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.650
KRL11920.1
Phosphatidic acid phosphatase.
  
 
 0.626
KRL08439.1
Hypothetical protein.
  
 
 0.626
KRL08484.1
DedA family protein.
       0.560
KRL12988.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
    
  0.552
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
     0.524
KRL08481.1
Fructokinase.
  
    0.474
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.