STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL08492.1Acetyltransferase. (186 aa)    
Predicted Functional Partners:
KRL08493.1
Hypothetical protein.
  
 
 0.981
tsaD
Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
  
 0.867
KRL08494.1
Hypothetical protein.
       0.731
KRL13489.1
Hypothetical protein.
  
  
 0.611
KRL13952.1
Hypothetical protein.
  
 
 0.581
KRL14683.1
Hypothetical protein.
  
 
 0.570
KRL12717.1
Hypothetical protein.
  
 
 0.570
KRL13130.1
Aromatic amino acid aminotransferase.
  
 
 0.556
KRL13829.1
Double-stranded beta-helix-like protein.
    
 0.552
KRL14499.1
Hypothetical protein.
  
 
 0.551
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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